Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA6Q8N139 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA6Q8N139 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.12■■■□□ 2.09
ABCA6Q8N139 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 DFFB-203ENST00000341385 572 ntTSL 5 BASIC28.12■■■□□ 2.09
ABCA6Q8N139 KRT18P23-201ENST00000435622 1283 ntBASIC28.12■■■□□ 2.09
ABCA6Q8N139 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC28.12■■■□□ 2.09
ABCA6Q8N139 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
ABCA6Q8N139 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
ABCA6Q8N139 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
ABCA6Q8N139 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA6Q8N139 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA6Q8N139 ENSA-205ENST00000361532 792 ntTSL 2 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 AC117500.6-201ENST00000624871 588 ntBASIC28.11■■■□□ 2.09
ABCA6Q8N139 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA6Q8N139 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA6Q8N139 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA6Q8N139 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA6Q8N139 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC28.11■■■□□ 2.09
ABCA6Q8N139 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC28.1■■■□□ 2.09
ABCA6Q8N139 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC28.1■■■□□ 2.09
ABCA6Q8N139 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 ELP6-205ENST00000439305 880 ntTSL 2 BASIC28.1■■■□□ 2.09
ABCA6Q8N139 AP003733.1-201ENST00000491725 852 ntBASIC28.1■■■□□ 2.09
ABCA6Q8N139 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.1■■■□□ 2.09
ABCA6Q8N139 LINC01711-201ENST00000598340 967 ntBASIC28.1■■■□□ 2.09
ABCA6Q8N139 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC28.1■■■□□ 2.09
ABCA6Q8N139 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.1■■■□□ 2.09
ABCA6Q8N139 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA6Q8N139 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCA6Q8N139 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
ABCA6Q8N139 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
ABCA6Q8N139 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
ABCA6Q8N139 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCA6Q8N139 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.09■■■□□ 2.09
ABCA6Q8N139 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA6Q8N139 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA6Q8N139 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA6Q8N139 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA6Q8N139 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA6Q8N139 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA6Q8N139 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC28.08■■■□□ 2.09
ABCA6Q8N139 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
ABCA6Q8N139 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 AC018712.1-201ENST00000455767 687 ntBASIC28.07■■■□□ 2.08
ABCA6Q8N139 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 AC005332.3-201ENST00000589904 676 ntBASIC28.07■■■□□ 2.08
ABCA6Q8N139 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 AL162377.1-201ENST00000618844 1793 ntBASIC28.07■■■□□ 2.08
ABCA6Q8N139 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC28.07■■■□□ 2.08
ABCA6Q8N139 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA6Q8N139 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms