Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC170Q8IYT3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 TSPY23P-201ENST00000440136 739 ntBASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CCDC170Q8IYT3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 AC068880.1-201ENST00000507289 2297 ntBASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 GUSBP6-202ENST00000438529 1198 ntBASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 AL160286.2-201ENST00000567150 934 ntBASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC170Q8IYT3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 AC126763.1-201ENST00000552015 2118 ntBASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 AC008687.6-201ENST00000596318 630 ntBASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC170Q8IYT3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms