Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 COX11P1-201ENST00000489116 835 ntBASIC20■□□□□ 0.79
SCN4BQ8IWT1 NME3-204ENST00000563498 920 ntTSL 2 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 MIR4674-201ENST00000582457 87 ntBASIC20■□□□□ 0.79
SCN4BQ8IWT1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20■□□□□ 0.79
SCN4BQ8IWT1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN4BQ8IWT1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 WWOX-216ENST00000569818 525 ntBASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 NTF6B-201ENST00000591913 560 ntBASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SCN4BQ8IWT1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 YBX1P2-201ENST00000489612 999 ntBASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.98■□□□□ 0.79
SCN4BQ8IWT1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 AC140113.3-201ENST00000605663 199 ntBASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 AL023973.1-201ENST00000624619 620 ntBASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN4BQ8IWT1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms