Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 AL391807.1-203ENST00000604392 2365 ntBASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 CHCHD2P8-201ENST00000429873 447 ntBASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 RN7SL510P-201ENST00000581311 263 ntBASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPAS4Q8IUM7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 AL109659.2-201ENST00000606809 1674 ntBASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPAS4Q8IUM7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 AL157384.1-201ENST00000445995 2473 ntBASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NPAS4Q8IUM7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 KRT8P7-201ENST00000533003 1432 ntBASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 Z82202.1-201ENST00000623446 1880 ntBASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 AC004870.1-201ENST00000315132 882 ntBASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 TSPY22P-201ENST00000427496 604 ntBASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 NUS1P1-201ENST00000446295 882 ntBASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.29■□□□□ 0.84
NPAS4Q8IUM7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms