Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK2Q86Y07 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 POU5F1P3-201ENST00000428824 1078 ntBASIC17.54■□□□□ 0.4
VRK2Q86Y07 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 AC009113.1-201ENST00000570267 2443 ntBASIC17.54■□□□□ 0.4
VRK2Q86Y07 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK2Q86Y07 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VRK2Q86Y07 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 HTR7P1-201ENST00000538670 1336 ntBASIC17.53■□□□□ 0.4
VRK2Q86Y07 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 AL445675.2-201ENST00000620291 557 ntBASIC17.53■□□□□ 0.4
VRK2Q86Y07 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 AC083906.6-201ENST00000641366 219 ntBASIC17.53■□□□□ 0.4
VRK2Q86Y07 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VRK2Q86Y07 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK2Q86Y07 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VRK2Q86Y07 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VRK2Q86Y07 NIFKP9-201ENST00000419265 221 ntBASIC17.52■□□□□ 0.4
VRK2Q86Y07 RPS2P4-201ENST00000476944 856 ntBASIC17.52■□□□□ 0.4
VRK2Q86Y07 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK2Q86Y07 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.52■□□□□ 0.4
VRK2Q86Y07 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.52■□□□□ 0.4
VRK2Q86Y07 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK2Q86Y07 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.52■□□□□ 0.39
VRK2Q86Y07 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VRK2Q86Y07 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.52■□□□□ 0.39
VRK2Q86Y07 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VRK2Q86Y07 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
VRK2Q86Y07 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK2Q86Y07 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK2Q86Y07 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
VRK2Q86Y07 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.52■□□□□ 0.39
VRK2Q86Y07 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VRK2Q86Y07 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms