Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 HBZP1-201ENST00000354915 429 ntBASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 AL023284.2-201ENST00000405850 579 ntBASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 MCCD1P1-208ENST00000445732 328 ntBASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 RASA4DP-201ENST00000460726 1199 ntBASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC149Q6ZUS6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 MIR3180-5-201ENST00000583743 153 ntBASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 AC092329.2-201ENST00000598402 547 ntBASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 KRT8P3-201ENST00000519669 1449 ntBASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC149Q6ZUS6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.89■□□□□ 0.78
CCDC149Q6ZUS6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 AC036111.1-201ENST00000533973 1582 ntBASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 AC111152.3-201ENST00000569699 673 ntBASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC149Q6ZUS6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC149Q6ZUS6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms