Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AP000525.1-201ENST00000608286 694 ntBASIC17.78■□□□□ 0.44
RTL4Q6ZR62 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 MESTP1-201ENST00000404287 994 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 MIR1238-201ENST00000408483 83 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AC211429.1-201ENST00000415277 523 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AC011506.1-201ENST00000474329 610 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL4Q6ZR62 LINC01023-201ENST00000606054 436 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 RCC2P6-201ENST00000526625 1557 ntBASIC17.77■□□□□ 0.44
RTL4Q6ZR62 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL4Q6ZR62 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL4Q6ZR62 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTL4Q6ZR62 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTL4Q6ZR62 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 AL032819.2-201ENST00000624543 2162 ntBASIC17.76■□□□□ 0.43
RTL4Q6ZR62 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 AC004951.3-201ENST00000418645 1148 ntBASIC17.76■□□□□ 0.43
RTL4Q6ZR62 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 AC011298.2-201ENST00000617989 482 ntBASIC17.76■□□□□ 0.43
RTL4Q6ZR62 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL4Q6ZR62 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 FITM1-202ENST00000559294 800 ntBASIC17.75■□□□□ 0.43
RTL4Q6ZR62 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 AC130371.2-201ENST00000619443 611 ntBASIC17.75■□□□□ 0.43
RTL4Q6ZR62 AC133561.5-201ENST00000635547 218 ntBASIC17.75■□□□□ 0.43
RTL4Q6ZR62 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL4Q6ZR62 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms