Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 AC134043.2-201ENST00000624206 2238 ntBASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM88Q6PEY1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 AC011676.5-201ENST00000624864 2660 ntBASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 AL118508.1-201ENST00000613502 2345 ntBASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 YBX1P1-201ENST00000445822 960 ntBASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM88Q6PEY1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 AL645608.8-201ENST00000606034 2086 ntBASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 NKILA-202ENST00000614771 2598 ntBASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM88Q6PEY1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM88Q6PEY1 UBALD1-205ENST00000590891 2641 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms