Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 AL353807.1-201ENST00000427475 662 ntBASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 AC120498.9-201ENST00000339021 3867 ntBASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZNF549Q6P9A3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 GCSHP5-201ENST00000443090 522 ntBASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AC142381.4-202ENST00000563973 229 ntBASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AC073195.1-201ENST00000607241 877 ntBASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ZNF549Q6P9A3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 AC011506.1-201ENST00000474329 610 ntBASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 AC083906.6-201ENST00000641366 219 ntBASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF549Q6P9A3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 AC004951.3-201ENST00000418645 1148 ntBASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.79■□□□□ 0.6
ZNF549Q6P9A3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms