Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 AC022616.7-201ENST00000525383 220 ntBASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 AL031432.5-201ENST00000641059 760 ntBASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.13■□□□□ 0.97
SWSAP1Q6NVH7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 AL441883.1-201ENST00000566170 1045 ntBASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.12■□□□□ 0.97
SWSAP1Q6NVH7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SWSAP1Q6NVH7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 FP475955.4-201ENST00000623131 1990 ntBASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.1■□□□□ 0.97
SWSAP1Q6NVH7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 FAM8A6P-201ENST00000407496 1135 ntBASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 AC087388.1-201ENST00000571370 1112 ntBASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.09■□□□□ 0.97
SWSAP1Q6NVH7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms