Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 GPR32P1-201ENST00000601788 811 ntBASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 AC055717.3-201ENST00000622967 595 ntBASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCRAQ6ISU1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 MINOS1P3-201ENST00000457048 203 ntBASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 AC027796.2-201ENST00000575326 344 ntBASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCRAQ6ISU1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 AC139887.3-201ENST00000568585 713 ntBASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 AC140113.2-201ENST00000604370 208 ntBASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCRAQ6ISU1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 AP005901.3-202ENST00000581653 237 ntBASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCRAQ6ISU1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms