Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 MCCD1P2-201ENST00000423228 335 ntBASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRPF38BQ5VTL8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 MTDHP3-201ENST00000594186 672 ntBASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPF38BQ5VTL8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 LINC01465-201ENST00000408887 1940 ntBASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 PRSS29P-201ENST00000440800 595 ntBASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 AL606495.2-201ENST00000605867 535 ntBASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 PHGDH-210ENST00000641115 1638 ntBASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPF38BQ5VTL8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 AC036111.1-201ENST00000533973 1582 ntBASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 AC096582.2-201ENST00000510860 516 ntBASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 AL359881.2-201ENST00000602973 570 ntBASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPF38BQ5VTL8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRPF38BQ5VTL8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRPF38BQ5VTL8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.51■□□□□ 0.87
PRPF38BQ5VTL8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms