Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF17Q5VTA0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 COX11P1-201ENST00000489116 835 ntBASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 AC063952.2-201ENST00000498792 1227 ntBASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 AC022616.7-201ENST00000525383 220 ntBASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 Z82202.1-201ENST00000623446 1880 ntBASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF17Q5VTA0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 AC008622.2-201ENST00000617006 1229 ntBASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF17Q5VTA0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 RNF152P1-201ENST00000397754 604 ntBASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF17Q5VTA0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 TSPY5P-201ENST00000426936 936 ntBASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 AL441883.1-201ENST00000566170 1045 ntBASIC18.04■□□□□ 0.48
PRAMEF17Q5VTA0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms