Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC233702.3-201ENST00000578656 1387 ntBASIC23.91■■□□□ 1.42
RC3H1Q5TC82 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 KRT16P4-201ENST00000453883 522 ntBASIC23.9■■□□□ 1.42
RC3H1Q5TC82 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 AP003733.1-201ENST00000491725 852 ntBASIC23.9■■□□□ 1.42
RC3H1Q5TC82 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.9■■□□□ 1.42
RC3H1Q5TC82 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RC3H1Q5TC82 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 AL353801.3-201ENST00000609898 542 ntBASIC23.89■■□□□ 1.41
RC3H1Q5TC82 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RC3H1Q5TC82 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 MRPL3P1-201ENST00000400109 1033 ntBASIC23.88■■□□□ 1.41
RC3H1Q5TC82 IGHV3-47-201ENST00000425060 335 ntBASIC23.88■■□□□ 1.41
RC3H1Q5TC82 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 AC074051.2-201ENST00000565115 352 ntBASIC23.88■■□□□ 1.41
RC3H1Q5TC82 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 IGHV3-41-201ENST00000613121 348 ntBASIC23.88■■□□□ 1.41
RC3H1Q5TC82 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RC3H1Q5TC82 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 AL512353.2-201ENST00000448759 1962 ntBASIC23.87■■□□□ 1.41
RC3H1Q5TC82 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RC3H1Q5TC82 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 TCF3P1-201ENST00000423021 1937 ntBASIC23.86■■□□□ 1.41
RC3H1Q5TC82 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 MIR3180-4-201ENST00000582223 153 ntBASIC23.86■■□□□ 1.41
RC3H1Q5TC82 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RC3H1Q5TC82 AC008556.1-201ENST00000610908 2040 ntBASIC23.86■■□□□ 1.41
RC3H1Q5TC82 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 HLA-A-201ENST00000376802 1334 ntBASIC23.85■■□□□ 1.41
RC3H1Q5TC82 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 RCC2P3-201ENST00000418112 1537 ntBASIC23.85■■□□□ 1.41
RC3H1Q5TC82 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms