Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP000550.4-202ENST00000639755 178 ntBASIC20.09■□□□□ 0.81
VARS2Q5ST30 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 AL158211.5-201ENST00000623583 2518 ntBASIC20.09■□□□□ 0.81
VARS2Q5ST30 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VARS2Q5ST30 SPDYE15P-201ENST00000424157 909 ntBASIC20.08■□□□□ 0.81
VARS2Q5ST30 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.08■□□□□ 0.81
VARS2Q5ST30 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARS2Q5ST30 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARS2Q5ST30 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARS2Q5ST30 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VARS2Q5ST30 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.08■□□□□ 0.8
VARS2Q5ST30 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 MIR3180-5-201ENST00000583743 153 ntBASIC20.07■□□□□ 0.8
VARS2Q5ST30 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
VARS2Q5ST30 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VARS2Q5ST30 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 NIFKP4-201ENST00000567275 1192 ntBASIC20.06■□□□□ 0.8
VARS2Q5ST30 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 HYMAI.1-201ENST00000620949 238 ntBASIC20.06■□□□□ 0.8
VARS2Q5ST30 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VARS2Q5ST30 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VARS2Q5ST30 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARS2Q5ST30 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.05■□□□□ 0.8
VARS2Q5ST30 AC005332.1-201ENST00000577698 1310 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms