Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35AQ53FP2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 UNC93B2-201ENST00000285383 730 ntBASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 SNORA78-201ENST00000459373 127 ntBASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 AC087289.5-201ENST00000586076 3175 ntBASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM35AQ53FP2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 AP005242.2-201ENST00000580065 1175 ntBASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 MIR4497-201ENST00000583208 89 ntBASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 RNF165-205ENST00000588679 2904 ntBASIC18.02■□□□□ 0.48
TMEM35AQ53FP2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM35AQ53FP2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM35AQ53FP2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.02■□□□□ 0.47
TMEM35AQ53FP2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM35AQ53FP2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms