Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD4Q53EL6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD4Q53EL6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.21■□□□□ 0.51
PDCD4Q53EL6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 TSPY6P-201ENST00000448518 926 ntBASIC18.21■□□□□ 0.51
PDCD4Q53EL6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 AC008687.6-201ENST00000596318 630 ntBASIC18.21■□□□□ 0.51
PDCD4Q53EL6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PDCD4Q53EL6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDCD4Q53EL6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
PDCD4Q53EL6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 SOX15-203ENST00000570788 1093 ntBASIC18.2■□□□□ 0.5
PDCD4Q53EL6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.2■□□□□ 0.5
PDCD4Q53EL6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD4Q53EL6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD4Q53EL6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms