Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.7■□□□□ 0.26
NKX6-1P78426 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NKX6-1P78426 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NKX6-1P78426 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NKX6-1P78426 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.7■□□□□ 0.26
NKX6-1P78426 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NKX6-1P78426 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX6-1P78426 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX6-1P78426 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX6-1P78426 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.69■□□□□ 0.26
NKX6-1P78426 MESTP1-201ENST00000404287 994 ntBASIC16.69■□□□□ 0.26
NKX6-1P78426 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 AC097488.1-201ENST00000507834 756 ntBASIC16.69■□□□□ 0.26
NKX6-1P78426 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.69■□□□□ 0.26
NKX6-1P78426 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.69■□□□□ 0.26
NKX6-1P78426 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
NKX6-1P78426 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NKX6-1P78426 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.69■□□□□ 0.26
NKX6-1P78426 DGCR10-201ENST00000609839 495 ntBASIC16.69■□□□□ 0.26
NKX6-1P78426 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.69■□□□□ 0.26
NKX6-1P78426 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
NKX6-1P78426 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.69■□□□□ 0.26
NKX6-1P78426 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NKX6-1P78426 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX6-1P78426 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NKX6-1P78426 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.68■□□□□ 0.26
NKX6-1P78426 AC063952.2-201ENST00000498792 1227 ntBASIC16.68■□□□□ 0.26
NKX6-1P78426 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
NKX6-1P78426 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX6-1P78426 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NKX6-1P78426 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX6-1P78426 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX6-1P78426 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NKX6-1P78426 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX6-1P78426 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX6-1P78426 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX6-1P78426 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX6-1P78426 B3GAT3P1-201ENST00000471720 806 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms