Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.12■□□□□ 0.65
PRAMEP78395 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PRAMEP78395 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.12■□□□□ 0.65
PRAMEP78395 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.12■□□□□ 0.65
PRAMEP78395 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.12■□□□□ 0.65
PRAMEP78395 KSR1P1-201ENST00000446298 240 ntBASIC19.12■□□□□ 0.65
PRAMEP78395 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.12■□□□□ 0.65
PRAMEP78395 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PRAMEP78395 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEP78395 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PRAMEP78395 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEP78395 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.12■□□□□ 0.65
PRAMEP78395 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEP78395 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 AC090340.1-201ENST00000620778 4980 ntBASIC19.11■□□□□ 0.65
PRAMEP78395 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.11■□□□□ 0.65
PRAMEP78395 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PRAMEP78395 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.11■□□□□ 0.65
PRAMEP78395 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.11■□□□□ 0.65
PRAMEP78395 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.11■□□□□ 0.65
PRAMEP78395 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.11■□□□□ 0.65
PRAMEP78395 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PRAMEP78395 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRAMEP78395 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PRAMEP78395 KRT8P41-201ENST00000533985 1514 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 AC006333.2-201ENST00000607957 2099 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 AC026471.1-201ENST00000564629 3026 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PRAMEP78395 AC093503.3-201ENST00000624917 2352 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PRAMEP78395 TSPY23P-201ENST00000440136 739 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.1■□□□□ 0.65
PRAMEP78395 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 RPS2P4-201ENST00000476944 856 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 Z85996.1-201ENST00000494644 937 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.1■□□□□ 0.65
PRAMEP78395 RARRES2P10-201ENST00000564312 460 ntBASIC19.1■□□□□ 0.65
PRAMEP78395 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PRAMEP78395 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PRAMEP78395 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.1■□□□□ 0.65
PRAMEP78395 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRAMEP78395 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.1■□□□□ 0.65
PRAMEP78395 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PRAMEP78395 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEP78395 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PRAMEP78395 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms