Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA4AP68366 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TUBA4AP68366 PGM5P4-201ENST00000421970 445 ntBASIC17.78■□□□□ 0.44
TUBA4AP68366 AC091874.3-201ENST00000512672 1195 ntBASIC17.78■□□□□ 0.44
TUBA4AP68366 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBA4AP68366 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TUBA4AP68366 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA4AP68366 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TUBA4AP68366 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA4AP68366 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
TUBA4AP68366 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBA4AP68366 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBA4AP68366 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBA4AP68366 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBA4AP68366 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA4AP68366 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBA4AP68366 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA4AP68366 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBA4AP68366 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBA4AP68366 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBA4AP68366 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBA4AP68366 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBA4AP68366 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBA4AP68366 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBA4AP68366 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBA4AP68366 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TUBA4AP68366 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TUBA4AP68366 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TUBA4AP68366 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TUBA4AP68366 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBA4AP68366 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TUBA4AP68366 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBA4AP68366 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TUBA4AP68366 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TUBA4AP68366 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBA4AP68366 AC083880.1-201ENST00000608266 535 ntBASIC17.76■□□□□ 0.43
TUBA4AP68366 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBA4AP68366 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBA4AP68366 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBA4AP68366 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA4AP68366 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TUBA4AP68366 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA4AP68366 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA4AP68366 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBA4AP68366 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA4AP68366 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBA4AP68366 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.75■□□□□ 0.43
TUBA4AP68366 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.75■□□□□ 0.43
TUBA4AP68366 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TUBA4AP68366 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBA4AP68366 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBA4AP68366 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
TUBA4AP68366 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms