Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH4P55283 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH4P55283 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.39■□□□□ 0.69
CDH4P55283 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH4P55283 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDH4P55283 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH4P55283 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH4P55283 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH4P55283 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH4P55283 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.38■□□□□ 0.69
CDH4P55283 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH4P55283 MIR4674-201ENST00000582457 87 ntBASIC19.38■□□□□ 0.69
CDH4P55283 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
CDH4P55283 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH4P55283 AC092865.7-201ENST00000641832 219 ntBASIC19.38■□□□□ 0.69
CDH4P55283 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH4P55283 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 AL512353.2-201ENST00000448759 1962 ntBASIC19.37■□□□□ 0.69
CDH4P55283 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CDH4P55283 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH4P55283 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH4P55283 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH4P55283 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 AL023284.2-201ENST00000405850 579 ntBASIC19.37■□□□□ 0.69
CDH4P55283 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 KRT18P21-201ENST00000515767 1272 ntBASIC19.37■□□□□ 0.69
CDH4P55283 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH4P55283 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH4P55283 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDH4P55283 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH4P55283 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH4P55283 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 GPAT2P1-201ENST00000444924 1672 ntBASIC19.36■□□□□ 0.69
CDH4P55283 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.36■□□□□ 0.69
CDH4P55283 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH4P55283 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH4P55283 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDH4P55283 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH4P55283 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
CDH4P55283 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH4P55283 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH4P55283 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH4P55283 AL138966.2-201ENST00000621997 464 ntBASIC19.36■□□□□ 0.69
CDH4P55283 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH4P55283 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDH4P55283 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CDH4P55283 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH4P55283 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH4P55283 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH4P55283 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH4P55283 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 KRT8P45-201ENST00000414328 1447 ntBASIC19.35■□□□□ 0.69
CDH4P55283 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CDH4P55283 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH4P55283 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms