Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP1B3P54709 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP1B3P54709 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP1B3P54709 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP1B3P54709 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP1B3P54709 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP1B3P54709 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATP1B3P54709 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ATP1B3P54709 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP1B3P54709 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.46■□□□□ 0.23
ATP1B3P54709 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP1B3P54709 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.46■□□□□ 0.22
ATP1B3P54709 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ATP1B3P54709 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ATP1B3P54709 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
ATP1B3P54709 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP1B3P54709 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP1B3P54709 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATP1B3P54709 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP1B3P54709 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP1B3P54709 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.45■□□□□ 0.22
ATP1B3P54709 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP1B3P54709 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP1B3P54709 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP1B3P54709 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP1B3P54709 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ATP1B3P54709 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 AL390961.4-201ENST00000623958 2535 ntBASIC16.45■□□□□ 0.22
ATP1B3P54709 AC009113.1-201ENST00000570267 2443 ntBASIC16.45■□□□□ 0.22
ATP1B3P54709 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
ATP1B3P54709 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 CROCCP3-202ENST00000420820 1947 ntBASIC16.45■□□□□ 0.22
ATP1B3P54709 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP1B3P54709 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP1B3P54709 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP1B3P54709 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 FP475955.4-201ENST00000623131 1990 ntBASIC16.44■□□□□ 0.22
ATP1B3P54709 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP1B3P54709 AC079598.2-202ENST00000546624 1451 ntBASIC16.44■□□□□ 0.22
ATP1B3P54709 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ATP1B3P54709 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP1B3P54709 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 UNC93B5-201ENST00000530315 699 ntBASIC16.44■□□□□ 0.22
ATP1B3P54709 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP1B3P54709 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ATP1B3P54709 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.44■□□□□ 0.22
ATP1B3P54709 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.44■□□□□ 0.22
ATP1B3P54709 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.44■□□□□ 0.22
ATP1B3P54709 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP1B3P54709 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.44■□□□□ 0.22
ATP1B3P54709 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP1B3P54709 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP1B3P54709 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP1B3P54709 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms