Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 GPALPP1-207ENST00000611650 899 ntBASIC20.9■□□□□ 0.94
ACLYP53396 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.9■□□□□ 0.94
ACLYP53396 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ACLYP53396 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACLYP53396 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ACLYP53396 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ACLYP53396 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.89■□□□□ 0.93
ACLYP53396 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.89■□□□□ 0.93
ACLYP53396 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.89■□□□□ 0.93
ACLYP53396 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.89■□□□□ 0.93
ACLYP53396 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ACLYP53396 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 AC023511.2-201ENST00000618803 211 ntBASIC20.89■□□□□ 0.93
ACLYP53396 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.89■□□□□ 0.93
ACLYP53396 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ACLYP53396 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ACLYP53396 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ACLYP53396 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.89■□□□□ 0.93
ACLYP53396 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACLYP53396 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.88■□□□□ 0.93
ACLYP53396 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ACLYP53396 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.88■□□□□ 0.93
ACLYP53396 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.88■□□□□ 0.93
ACLYP53396 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.88■□□□□ 0.93
ACLYP53396 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.88■□□□□ 0.93
ACLYP53396 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.88■□□□□ 0.93
ACLYP53396 AC004263.2-201ENST00000617183 678 ntBASIC20.88■□□□□ 0.93
ACLYP53396 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.88■□□□□ 0.93
ACLYP53396 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACLYP53396 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.88■□□□□ 0.93
ACLYP53396 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ACLYP53396 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ACLYP53396 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.87■□□□□ 0.93
ACLYP53396 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.87■□□□□ 0.93
ACLYP53396 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ACLYP53396 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
ACLYP53396 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 AC104819.1-201ENST00000504587 486 ntBASIC20.87■□□□□ 0.93
ACLYP53396 AC106795.1-205ENST00000512851 1056 ntBASIC20.87■□□□□ 0.93
ACLYP53396 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.87■□□□□ 0.93
ACLYP53396 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.87■□□□□ 0.93
ACLYP53396 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ACLYP53396 AC090616.6-201ENST00000582640 721 ntBASIC20.87■□□□□ 0.93
ACLYP53396 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.87■□□□□ 0.93
ACLYP53396 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ACLYP53396 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ACLYP53396 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.87■□□□□ 0.93
ACLYP53396 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACLYP53396 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.87■□□□□ 0.93
ACLYP53396 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 KRT18P23-201ENST00000435622 1283 ntBASIC20.86■□□□□ 0.93
ACLYP53396 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.86■□□□□ 0.93
ACLYP53396 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.86■□□□□ 0.93
ACLYP53396 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.86■□□□□ 0.93
ACLYP53396 AP002469.2-201ENST00000531724 424 ntBASIC20.86■□□□□ 0.93
ACLYP53396 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.86■□□□□ 0.93
ACLYP53396 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.86■□□□□ 0.93
ACLYP53396 SLC25A6P4-201ENST00000586535 553 ntBASIC20.86■□□□□ 0.93
ACLYP53396 AC010240.3-201ENST00000607688 395 ntBASIC20.86■□□□□ 0.93
ACLYP53396 AC006538.3-201ENST00000612495 578 ntBASIC20.86■□□□□ 0.93
ACLYP53396 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ACLYP53396 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACLYP53396 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms