Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 KRT8P11-201ENST00000409686 1436 ntBASIC18.41■□□□□ 0.54
PDX1P52945 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PDX1P52945 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDX1P52945 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 PRSS44-201ENST00000515154 1146 ntBASIC18.41■□□□□ 0.54
PDX1P52945 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.41■□□□□ 0.54
PDX1P52945 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.41■□□□□ 0.54
PDX1P52945 AL121894.2-201ENST00000602977 491 ntBASIC18.41■□□□□ 0.54
PDX1P52945 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDX1P52945 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 AC009237.14-201ENST00000609975 1594 ntBASIC18.41■□□□□ 0.54
PDX1P52945 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.41■□□□□ 0.54
PDX1P52945 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDX1P52945 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDX1P52945 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDX1P52945 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDX1P52945 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDX1P52945 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.4■□□□□ 0.54
PDX1P52945 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.4■□□□□ 0.54
PDX1P52945 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.4■□□□□ 0.54
PDX1P52945 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
PDX1P52945 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.4■□□□□ 0.54
PDX1P52945 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.4■□□□□ 0.54
PDX1P52945 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDX1P52945 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDX1P52945 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PDX1P52945 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.4■□□□□ 0.54
PDX1P52945 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDX1P52945 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PDX1P52945 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDX1P52945 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.54
PDX1P52945 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PDX1P52945 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDX1P52945 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PDX1P52945 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDX1P52945 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.39■□□□□ 0.53
PDX1P52945 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.39■□□□□ 0.53
PDX1P52945 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.39■□□□□ 0.53
PDX1P52945 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.39■□□□□ 0.53
PDX1P52945 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 KRT126P-201ENST00000549467 1181 ntBASIC18.39■□□□□ 0.53
PDX1P52945 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDX1P52945 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDX1P52945 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.39■□□□□ 0.53
PDX1P52945 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDX1P52945 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
PDX1P52945 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.38■□□□□ 0.53
PDX1P52945 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDX1P52945 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PDX1P52945 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PDX1P52945 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PDX1P52945 DUSP5P1-201ENST00000441325 1139 ntBASIC18.38■□□□□ 0.53
PDX1P52945 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.38■□□□□ 0.53
PDX1P52945 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
PDX1P52945 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.38■□□□□ 0.53
PDX1P52945 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PDX1P52945 AC140113.3-201ENST00000605663 199 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms