Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GTF2A1P52655 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 Z98044.1-201ENST00000632503 1764 ntBASIC18.63■□□□□ 0.57
GTF2A1P52655 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2A1P52655 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GTF2A1P52655 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.63■□□□□ 0.57
GTF2A1P52655 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.63■□□□□ 0.57
GTF2A1P52655 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.62■□□□□ 0.57
GTF2A1P52655 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2A1P52655 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GTF2A1P52655 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2A1P52655 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.62■□□□□ 0.57
GTF2A1P52655 AL034346.1-201ENST00000568244 1277 ntBASIC18.62■□□□□ 0.57
GTF2A1P52655 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.62■□□□□ 0.57
GTF2A1P52655 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.62■□□□□ 0.57
GTF2A1P52655 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GTF2A1P52655 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2A1P52655 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 AC005052.1-201ENST00000625181 2492 ntBASIC18.62■□□□□ 0.57
GTF2A1P52655 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.62■□□□□ 0.57
GTF2A1P52655 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GTF2A1P52655 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.61■□□□□ 0.57
GTF2A1P52655 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
GTF2A1P52655 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A1P52655 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A1P52655 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A1P52655 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A1P52655 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GTF2A1P52655 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A1P52655 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
GTF2A1P52655 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.61■□□□□ 0.57
GTF2A1P52655 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.61■□□□□ 0.57
GTF2A1P52655 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A1P52655 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
GTF2A1P52655 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A1P52655 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
GTF2A1P52655 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GTF2A1P52655 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
GTF2A1P52655 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2A1P52655 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
GTF2A1P52655 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2A1P52655 PCDHB19P-201ENST00000570871 2371 ntBASIC18.6■□□□□ 0.57
GTF2A1P52655 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A1P52655 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GTF2A1P52655 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A1P52655 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms