Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK3P51956 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NEK3P51956 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NEK3P51956 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.54■□□□□ 0.72
NEK3P51956 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NEK3P51956 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.54■□□□□ 0.72
NEK3P51956 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 AC005082.1-201ENST00000413042 2259 ntBASIC19.54■□□□□ 0.72
NEK3P51956 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NEK3P51956 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK3P51956 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.53■□□□□ 0.72
NEK3P51956 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NEK3P51956 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK3P51956 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NEK3P51956 B3GAT3P1-201ENST00000471720 806 ntBASIC19.53■□□□□ 0.72
NEK3P51956 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.53■□□□□ 0.72
NEK3P51956 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.53■□□□□ 0.72
NEK3P51956 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.53■□□□□ 0.72
NEK3P51956 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.53■□□□□ 0.72
NEK3P51956 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK3P51956 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
NEK3P51956 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK3P51956 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.53■□□□□ 0.72
NEK3P51956 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 AL161938.1-201ENST00000569833 2180 ntBASIC19.53■□□□□ 0.72
NEK3P51956 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NEK3P51956 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK3P51956 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.53■□□□□ 0.72
NEK3P51956 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.52■□□□□ 0.72
NEK3P51956 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NEK3P51956 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK3P51956 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NEK3P51956 MESTP1-201ENST00000404287 994 ntBASIC19.52■□□□□ 0.72
NEK3P51956 MIR1238-201ENST00000408483 83 ntBASIC19.52■□□□□ 0.72
NEK3P51956 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK3P51956 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.52■□□□□ 0.72
NEK3P51956 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
NEK3P51956 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.52■□□□□ 0.72
NEK3P51956 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NEK3P51956 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.52■□□□□ 0.72
NEK3P51956 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.52■□□□□ 0.72
NEK3P51956 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NEK3P51956 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NEK3P51956 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.52■□□□□ 0.72
NEK3P51956 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
NEK3P51956 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.52■□□□□ 0.71
NEK3P51956 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEK3P51956 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEK3P51956 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEK3P51956 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NEK3P51956 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
NEK3P51956 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
NEK3P51956 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.51■□□□□ 0.71
NEK3P51956 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.51■□□□□ 0.71
NEK3P51956 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.51■□□□□ 0.71
NEK3P51956 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK3P51956 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms