Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF144AP50876 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF144AP50876 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF144AP50876 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RNF144AP50876 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF144AP50876 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF144AP50876 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF144AP50876 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RNF144AP50876 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF144AP50876 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF144AP50876 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF144AP50876 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF144AP50876 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF144AP50876 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF144AP50876 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RNF144AP50876 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 NIFKP9-201ENST00000419265 221 ntBASIC17.61■□□□□ 0.41
RNF144AP50876 FAM197Y1-201ENST00000421178 764 ntBASIC17.61■□□□□ 0.41
RNF144AP50876 Z85996.1-201ENST00000494644 937 ntBASIC17.61■□□□□ 0.41
RNF144AP50876 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF144AP50876 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF144AP50876 AF186192.3-201ENST00000583427 947 ntBASIC17.61■□□□□ 0.41
RNF144AP50876 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF144AP50876 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.61■□□□□ 0.41
RNF144AP50876 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF144AP50876 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 KRT8P41-201ENST00000533985 1514 ntBASIC17.61■□□□□ 0.41
RNF144AP50876 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF144AP50876 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF144AP50876 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RNF144AP50876 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF144AP50876 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF144AP50876 AC006333.2-201ENST00000607957 2099 ntBASIC17.6■□□□□ 0.41
RNF144AP50876 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF144AP50876 HCG11-201ENST00000411553 5696 ntBASIC17.6■□□□□ 0.41
RNF144AP50876 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF144AP50876 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RNF144AP50876 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF144AP50876 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF144AP50876 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF144AP50876 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF144AP50876 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF144AP50876 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF144AP50876 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.6■□□□□ 0.41
RNF144AP50876 AL138781.2-201ENST00000617896 1843 ntBASIC17.6■□□□□ 0.41
RNF144AP50876 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF144AP50876 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF144AP50876 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms