Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.62■□□□□ 0.73
PTPN7P35236 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTPN7P35236 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTPN7P35236 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTPN7P35236 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN7P35236 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN7P35236 AC073648.6-201ENST00000641589 218 ntBASIC19.62■□□□□ 0.73
PTPN7P35236 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTPN7P35236 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN7P35236 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN7P35236 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.61■□□□□ 0.73
PTPN7P35236 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPN7P35236 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN7P35236 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN7P35236 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN7P35236 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN7P35236 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.61■□□□□ 0.73
PTPN7P35236 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.61■□□□□ 0.73
PTPN7P35236 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.61■□□□□ 0.73
PTPN7P35236 AC068587.9-201ENST00000641814 219 ntBASIC19.61■□□□□ 0.73
PTPN7P35236 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN7P35236 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN7P35236 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.61■□□□□ 0.73
PTPN7P35236 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN7P35236 BICD1-207ENST00000551848 1962 ntBASIC19.61■□□□□ 0.73
PTPN7P35236 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN7P35236 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PTPN7P35236 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 AC073592.3-201ENST00000625118 1834 ntBASIC19.6■□□□□ 0.73
PTPN7P35236 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN7P35236 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN7P35236 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN7P35236 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PTPN7P35236 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTPN7P35236 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PTPN7P35236 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN7P35236 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN7P35236 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PTPN7P35236 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN7P35236 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN7P35236 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 KRT8P3-201ENST00000519669 1449 ntBASIC19.59■□□□□ 0.73
PTPN7P35236 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPN7P35236 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN7P35236 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 MTMR9LP-203ENST00000426597 1545 ntBASIC19.59■□□□□ 0.73
PTPN7P35236 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 KRT8P32-201ENST00000512863 1461 ntBASIC19.59■□□□□ 0.73
PTPN7P35236 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPN7P35236 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN7P35236 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN7P35236 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.58■□□□□ 0.73
PTPN7P35236 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms