Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC13P31276 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 KRT18P38-201ENST00000449496 1282 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 AL359075.1-203ENST00000462729 1002 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 COX11P1-201ENST00000489116 835 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC13P31276 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC13P31276 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC13P31276 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC13P31276 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC13P31276 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC13P31276 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC13P31276 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC13P31276 AL023973.1-201ENST00000624619 620 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC13P31276 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXC13P31276 AP000550.4-202ENST00000639755 178 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 AC116562.4-202ENST00000641738 218 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXC13P31276 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC13P31276 AC092338.2-201ENST00000568827 1415 ntBASIC19.65■□□□□ 0.74
HOXC13P31276 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC13P31276 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXC13P31276 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC13P31276 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.64■□□□□ 0.74
HOXC13P31276 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC13P31276 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HOXC13P31276 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HOXC13P31276 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC13P31276 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXC13P31276 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HOXC13P31276 AL441883.1-201ENST00000566170 1045 ntBASIC19.64■□□□□ 0.73
HOXC13P31276 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
HOXC13P31276 AL023803.3-201ENST00000615559 522 ntBASIC19.64■□□□□ 0.73
HOXC13P31276 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HOXC13P31276 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXC13P31276 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC13P31276 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 AL161938.1-201ENST00000569833 2180 ntBASIC19.64■□□□□ 0.73
HOXC13P31276 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC13P31276 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HOXC13P31276 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXC13P31276 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC13P31276 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HOXC13P31276 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC13P31276 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC13P31276 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HOXC13P31276 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC13P31276 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXC13P31276 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC13P31276 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC13P31276 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC13P31276 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC13P31276 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC13P31276 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXC13P31276 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC13P31276 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXC13P31276 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
HOXC13P31276 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 KRT18P48-201ENST00000434763 852 ntBASIC19.62■□□□□ 0.73
HOXC13P31276 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC13P31276 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC13P31276 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.62■□□□□ 0.73
HOXC13P31276 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC13P31276 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC13P31276 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
HOXC13P31276 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC13P31276 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC13P31276 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC13P31276 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC13P31276 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC13P31276 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC13P31276 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms