Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.57■□□□□ 0.4
LCN1P31025 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LCN1P31025 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCN1P31025 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCN1P31025 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.57■□□□□ 0.4
LCN1P31025 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCN1P31025 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
LCN1P31025 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCN1P31025 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LCN1P31025 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LCN1P31025 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.56■□□□□ 0.4
LCN1P31025 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LCN1P31025 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LCN1P31025 B3GAT3P1-201ENST00000471720 806 ntBASIC17.56■□□□□ 0.4
LCN1P31025 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.56■□□□□ 0.4
LCN1P31025 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.56■□□□□ 0.4
LCN1P31025 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LCN1P31025 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.56■□□□□ 0.4
LCN1P31025 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.56■□□□□ 0.4
LCN1P31025 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.56■□□□□ 0.4
LCN1P31025 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.56■□□□□ 0.4
LCN1P31025 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 HCG11-201ENST00000411553 5696 ntBASIC17.56■□□□□ 0.4
LCN1P31025 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LCN1P31025 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LCN1P31025 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.55■□□□□ 0.4
LCN1P31025 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LCN1P31025 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LCN1P31025 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LCN1P31025 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.55■□□□□ 0.4
LCN1P31025 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LCN1P31025 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.55■□□□□ 0.4
LCN1P31025 FAM207BP-201ENST00000447172 505 ntBASIC17.55■□□□□ 0.4
LCN1P31025 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.55■□□□□ 0.4
LCN1P31025 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.55■□□□□ 0.4
LCN1P31025 AP000692.2-201ENST00000608391 879 ntBASIC17.55■□□□□ 0.4
LCN1P31025 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.55■□□□□ 0.4
LCN1P31025 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LCN1P31025 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LCN1P31025 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.55■□□□□ 0.4
LCN1P31025 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LCN1P31025 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.55■□□□□ 0.4
LCN1P31025 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCN1P31025 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LCN1P31025 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
LCN1P31025 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LCN1P31025 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LCN1P31025 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.54■□□□□ 0.4
LCN1P31025 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.54■□□□□ 0.4
LCN1P31025 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
LCN1P31025 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.54■□□□□ 0.4
LCN1P31025 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.54■□□□□ 0.4
LCN1P31025 Z99916.2-201ENST00000604037 246 ntBASIC17.54■□□□□ 0.4
LCN1P31025 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.54■□□□□ 0.4
LCN1P31025 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LCN1P31025 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LCN1P31025 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LCN1P31025 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.54■□□□□ 0.4
LCN1P31025 AC090340.1-201ENST00000620778 4980 ntBASIC17.54■□□□□ 0.4
LCN1P31025 KRT8P11-201ENST00000409686 1436 ntBASIC17.54■□□□□ 0.4
LCN1P31025 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCN1P31025 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms