Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.63■□□□□ 0.41
TNFRSF1BP20333 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 AL354751.1-201ENST00000412768 1863 ntBASIC17.63■□□□□ 0.41
TNFRSF1BP20333 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF1BP20333 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.62■□□□□ 0.41
TNFRSF1BP20333 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 AC083906.6-201ENST00000641366 219 ntBASIC17.62■□□□□ 0.41
TNFRSF1BP20333 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF1BP20333 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF1BP20333 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF1BP20333 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms