Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PTPN1P18031 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN1P18031 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.07■□□□□ 0.8
PTPN1P18031 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN1P18031 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTPN1P18031 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN1P18031 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN1P18031 MIR4674-201ENST00000582457 87 ntBASIC20.07■□□□□ 0.8
PTPN1P18031 AL138966.2-201ENST00000621997 464 ntBASIC20.07■□□□□ 0.8
PTPN1P18031 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN1P18031 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN1P18031 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN1P18031 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 KRT8P45-201ENST00000414328 1447 ntBASIC20.06■□□□□ 0.8
PTPN1P18031 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN1P18031 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN1P18031 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPN1P18031 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN1P18031 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN1P18031 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PTPN1P18031 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN1P18031 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPN1P18031 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN1P18031 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPN1P18031 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN1P18031 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PTPN1P18031 AL512604.3-201ENST00000569583 964 ntBASIC20.05■□□□□ 0.8
PTPN1P18031 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN1P18031 GPAT2P1-201ENST00000444924 1672 ntBASIC20.05■□□□□ 0.8
PTPN1P18031 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN1P18031 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN1P18031 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN1P18031 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN1P18031 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN1P18031 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.05■□□□□ 0.8
PTPN1P18031 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN1P18031 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN1P18031 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN1P18031 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 AL023284.2-201ENST00000405850 579 ntBASIC20.04■□□□□ 0.8
PTPN1P18031 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN1P18031 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN1P18031 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN1P18031 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN1P18031 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN1P18031 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPN1P18031 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN1P18031 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms