Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
GAP43P17677 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GAP43P17677 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
GAP43P17677 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
GAP43P17677 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.93■□□□□ 0.94
GAP43P17677 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.93■□□□□ 0.94
GAP43P17677 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.93■□□□□ 0.94
GAP43P17677 AL355075.4-201ENST00000554988 638 ntBASIC20.93■□□□□ 0.94
GAP43P17677 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.93■□□□□ 0.94
GAP43P17677 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
GAP43P17677 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GAP43P17677 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.93■□□□□ 0.94
GAP43P17677 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
GAP43P17677 AC079598.2-202ENST00000546624 1451 ntBASIC20.93■□□□□ 0.94
GAP43P17677 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GAP43P17677 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
GAP43P17677 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.93■□□□□ 0.94
GAP43P17677 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
GAP43P17677 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.92■□□□□ 0.94
GAP43P17677 CA15P1-201ENST00000481698 905 ntBASIC20.92■□□□□ 0.94
GAP43P17677 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.92■□□□□ 0.94
GAP43P17677 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.92■□□□□ 0.94
GAP43P17677 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.92■□□□□ 0.94
GAP43P17677 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.92■□□□□ 0.94
GAP43P17677 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GAP43P17677 AC087289.5-201ENST00000586076 3175 ntBASIC20.91■□□□□ 0.94
GAP43P17677 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GAP43P17677 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GAP43P17677 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.91■□□□□ 0.94
GAP43P17677 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GAP43P17677 AL596275.1-201ENST00000423464 877 ntBASIC20.91■□□□□ 0.94
GAP43P17677 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GAP43P17677 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GAP43P17677 FITM1-202ENST00000559294 800 ntBASIC20.91■□□□□ 0.94
GAP43P17677 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.91■□□□□ 0.94
GAP43P17677 AP000525.1-201ENST00000608286 694 ntBASIC20.91■□□□□ 0.94
GAP43P17677 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GAP43P17677 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GAP43P17677 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.9■□□□□ 0.94
GAP43P17677 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GAP43P17677 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
GAP43P17677 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GAP43P17677 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
GAP43P17677 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.9■□□□□ 0.94
GAP43P17677 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GAP43P17677 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.9■□□□□ 0.94
GAP43P17677 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.9■□□□□ 0.94
GAP43P17677 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GAP43P17677 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GAP43P17677 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GAP43P17677 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GAP43P17677 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.89■□□□□ 0.94
GAP43P17677 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
GAP43P17677 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GAP43P17677 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
GAP43P17677 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
GAP43P17677 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GAP43P17677 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.89■□□□□ 0.93
GAP43P17677 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms