Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.65■□□□□ 0.9
SYN1P17600 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
SYN1P17600 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYN1P17600 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SYN1P17600 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.64■□□□□ 0.89
SYN1P17600 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SYN1P17600 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.64■□□□□ 0.89
SYN1P17600 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 RPS8P6-201ENST00000426177 609 ntBASIC20.64■□□□□ 0.89
SYN1P17600 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.64■□□□□ 0.89
SYN1P17600 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.64■□□□□ 0.89
SYN1P17600 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.64■□□□□ 0.89
SYN1P17600 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.64■□□□□ 0.89
SYN1P17600 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SYN1P17600 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SYN1P17600 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SYN1P17600 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.64■□□□□ 0.89
SYN1P17600 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYN1P17600 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SYN1P17600 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.63■□□□□ 0.89
SYN1P17600 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SYN1P17600 AL592071.1-201ENST00000611956 408 ntBASIC20.63■□□□□ 0.89
SYN1P17600 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SYN1P17600 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SYN1P17600 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SYN1P17600 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SYN1P17600 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYN1P17600 ZNF259P1-201ENST00000407656 1365 ntBASIC20.62■□□□□ 0.89
SYN1P17600 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.62■□□□□ 0.89
SYN1P17600 AC091607.1-201ENST00000490318 1060 ntBASIC20.62■□□□□ 0.89
SYN1P17600 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.62■□□□□ 0.89
SYN1P17600 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.62■□□□□ 0.89
SYN1P17600 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.62■□□□□ 0.89
SYN1P17600 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.62■□□□□ 0.89
SYN1P17600 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.62■□□□□ 0.89
SYN1P17600 AP005901.3-202ENST00000581653 237 ntBASIC20.62■□□□□ 0.89
SYN1P17600 AC140113.2-201ENST00000604370 208 ntBASIC20.62■□□□□ 0.89
SYN1P17600 MIR7706-201ENST00000613747 67 ntBASIC20.62■□□□□ 0.89
SYN1P17600 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.62■□□□□ 0.89
SYN1P17600 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYN1P17600 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYN1P17600 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYN1P17600 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.62■□□□□ 0.89
SYN1P17600 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYN1P17600 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYN1P17600 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYN1P17600 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.62■□□□□ 0.89
SYN1P17600 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYN1P17600 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.61■□□□□ 0.89
SYN1P17600 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYN1P17600 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYN1P17600 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.61■□□□□ 0.89
SYN1P17600 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYN1P17600 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms