Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.83□□□□□ -0.04
CD28P10747 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.83□□□□□ -0.04
CD28P10747 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
CD28P10747 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD28P10747 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.82□□□□□ -0.04
CD28P10747 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CD28P10747 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.82□□□□□ -0.04
CD28P10747 AC090340.1-201ENST00000620778 4980 ntBASIC14.82□□□□□ -0.04
CD28P10747 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 AC009947.2-201ENST00000444014 672 ntBASIC14.82□□□□□ -0.04
CD28P10747 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.82□□□□□ -0.04
CD28P10747 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.82□□□□□ -0.04
CD28P10747 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.82□□□□□ -0.04
CD28P10747 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD28P10747 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CD28P10747 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD28P10747 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.81□□□□□ -0.04
CD28P10747 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.81□□□□□ -0.04
CD28P10747 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 AL671277.2-201ENST00000458060 996 ntBASIC14.81□□□□□ -0.04
CD28P10747 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.81□□□□□ -0.04
CD28P10747 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD28P10747 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.81□□□□□ -0.04
CD28P10747 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.81□□□□□ -0.04
CD28P10747 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.81□□□□□ -0.04
CD28P10747 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CD28P10747 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD28P10747 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.81□□□□□ -0.04
CD28P10747 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.81□□□□□ -0.04
CD28P10747 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD28P10747 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CD28P10747 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD28P10747 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
CD28P10747 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms