Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 AC104417.2-201ENST00000562989 1793 ntBASIC15.04■□□□□ -0
PF4V1P10720 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 RCC2P6-201ENST00000526625 1557 ntBASIC15.04■□□□□ -0
PF4V1P10720 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 KRT18P35-201ENST00000510488 1269 ntBASIC15.04■□□□□ -0
PF4V1P10720 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
PF4V1P10720 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.04■□□□□ -0
PF4V1P10720 AP005242.2-201ENST00000580065 1175 ntBASIC15.04■□□□□ -0
PF4V1P10720 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.04■□□□□ -0
PF4V1P10720 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.04■□□□□ -0
PF4V1P10720 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PF4V1P10720 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PF4V1P10720 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PF4V1P10720 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.03■□□□□ -0
PF4V1P10720 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.03■□□□□ -0
PF4V1P10720 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.03■□□□□ -0
PF4V1P10720 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PF4V1P10720 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 TERF1P1-201ENST00000311003 1181 ntBASIC15.03■□□□□ -0
PF4V1P10720 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.03■□□□□ -0
PF4V1P10720 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.03■□□□□ -0
PF4V1P10720 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 AC011506.1-201ENST00000474329 610 ntBASIC15.03■□□□□ -0
PF4V1P10720 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.03■□□□□ -0
PF4V1P10720 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.03■□□□□ -0
PF4V1P10720 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.03■□□□□ -0
PF4V1P10720 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.03■□□□□ -0
PF4V1P10720 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PF4V1P10720 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.03■□□□□ -0
PF4V1P10720 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
PF4V1P10720 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.02■□□□□ -0
PF4V1P10720 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.02■□□□□ -0
PF4V1P10720 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PF4V1P10720 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PF4V1P10720 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PF4V1P10720 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.02■□□□□ -0
PF4V1P10720 FAM207BP-201ENST00000447172 505 ntBASIC15.02■□□□□ -0
PF4V1P10720 Z85996.1-201ENST00000494644 937 ntBASIC15.02■□□□□ -0
PF4V1P10720 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.02■□□□□ -0
PF4V1P10720 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.02■□□□□ -0
PF4V1P10720 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.02■□□□□ -0
PF4V1P10720 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.02■□□□□ -0
PF4V1P10720 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PF4V1P10720 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PF4V1P10720 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PF4V1P10720 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PF4V1P10720 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PF4V1P10720 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PF4V1P10720 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PF4V1P10720 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.01□□□□□ -0.01
PF4V1P10720 Z82202.1-201ENST00000623446 1880 ntBASIC15.01□□□□□ -0.01
PF4V1P10720 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.01□□□□□ -0.01
PF4V1P10720 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PF4V1P10720 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.01□□□□□ -0.01
PF4V1P10720 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms