Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TPM1P09493 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 FEM1AP3-201ENST00000403722 1741 ntBASIC20.89■□□□□ 0.93
TPM1P09493 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.89■□□□□ 0.93
TPM1P09493 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM1P09493 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM1P09493 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM1P09493 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.88■□□□□ 0.93
TPM1P09493 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TPM1P09493 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TPM1P09493 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM1P09493 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM1P09493 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.87■□□□□ 0.93
TPM1P09493 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.87■□□□□ 0.93
TPM1P09493 AF201337.1-201ENST00000520239 748 ntBASIC20.87■□□□□ 0.93
TPM1P09493 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.87■□□□□ 0.93
TPM1P09493 AC105036.2-201ENST00000569468 176 ntBASIC20.87■□□□□ 0.93
TPM1P09493 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM1P09493 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.87■□□□□ 0.93
TPM1P09493 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TPM1P09493 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM1P09493 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM1P09493 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TPM1P09493 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM1P09493 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TPM1P09493 AL133373.2-201ENST00000623187 2828 ntBASIC20.86■□□□□ 0.93
TPM1P09493 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TPM1P09493 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TPM1P09493 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TPM1P09493 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM1P09493 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM1P09493 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM1P09493 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TPM1P09493 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.86■□□□□ 0.93
TPM1P09493 AC006557.6-201ENST00000623071 864 ntBASIC20.86■□□□□ 0.93
TPM1P09493 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.86■□□□□ 0.93
TPM1P09493 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.86■□□□□ 0.93
TPM1P09493 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
TPM1P09493 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM1P09493 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TPM1P09493 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
TPM1P09493 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TPM1P09493 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.86■□□□□ 0.93
TPM1P09493 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 AC124283.5-201ENST00000624661 1809 ntBASIC20.85■□□□□ 0.93
TPM1P09493 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TPM1P09493 NOC2LP1-202ENST00000452600 2235 ntBASIC20.85■□□□□ 0.93
TPM1P09493 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.85■□□□□ 0.93
TPM1P09493 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms