Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.64■□□□□ 0.73
IFNB1P01574 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.64■□□□□ 0.73
IFNB1P01574 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.64■□□□□ 0.73
IFNB1P01574 RNA5SP413-201ENST00000516373 109 ntBASIC19.64■□□□□ 0.73
IFNB1P01574 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.64■□□□□ 0.73
IFNB1P01574 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.64■□□□□ 0.73
IFNB1P01574 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.64■□□□□ 0.73
IFNB1P01574 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
IFNB1P01574 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
IFNB1P01574 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.64■□□□□ 0.73
IFNB1P01574 Z98044.1-201ENST00000632503 1764 ntBASIC19.64■□□□□ 0.73
IFNB1P01574 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
IFNB1P01574 AL512353.2-201ENST00000448759 1962 ntBASIC19.64■□□□□ 0.73
IFNB1P01574 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.64■□□□□ 0.73
IFNB1P01574 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IFNB1P01574 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
IFNB1P01574 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
IFNB1P01574 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.63■□□□□ 0.73
IFNB1P01574 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.63■□□□□ 0.73
IFNB1P01574 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IFNB1P01574 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IFNB1P01574 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.63■□□□□ 0.73
IFNB1P01574 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.63■□□□□ 0.73
IFNB1P01574 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.63■□□□□ 0.73
IFNB1P01574 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.63■□□□□ 0.73
IFNB1P01574 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 AC008403.3-201ENST00000598924 454 ntBASIC19.63■□□□□ 0.73
IFNB1P01574 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.63■□□□□ 0.73
IFNB1P01574 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
IFNB1P01574 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.63■□□□□ 0.73
IFNB1P01574 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IFNB1P01574 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.62■□□□□ 0.73
IFNB1P01574 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
IFNB1P01574 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFNB1P01574 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 AC093525.10-201ENST00000625130 1569 ntBASIC19.61■□□□□ 0.73
IFNB1P01574 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.61■□□□□ 0.73
IFNB1P01574 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
IFNB1P01574 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
IFNB1P01574 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.61■□□□□ 0.73
IFNB1P01574 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
IFNB1P01574 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
IFNB1P01574 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFNB1P01574 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.61■□□□□ 0.73
IFNB1P01574 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
IFNB1P01574 AP003097.1-201ENST00000530657 1135 ntBASIC19.61■□□□□ 0.73
IFNB1P01574 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.61■□□□□ 0.73
IFNB1P01574 AL160286.2-201ENST00000567150 934 ntBASIC19.61■□□□□ 0.73
IFNB1P01574 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.61■□□□□ 0.73
IFNB1P01574 AC004264.1-201ENST00000608354 794 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms