Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ALDH1A1P00352 AC079834.2-201ENST00000609776 1949 ntBASIC21.65■■□□□ 1.06
ALDH1A1P00352 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.65■■□□□ 1.06
ALDH1A1P00352 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ALDH1A1P00352 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ALDH1A1P00352 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ALDH1A1P00352 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALDH1A1P00352 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALDH1A1P00352 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ALDH1A1P00352 KRT18P23-201ENST00000435622 1283 ntBASIC21.64■■□□□ 1.05
ALDH1A1P00352 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALDH1A1P00352 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.64■■□□□ 1.05
ALDH1A1P00352 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.64■■□□□ 1.05
ALDH1A1P00352 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALDH1A1P00352 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.64■■□□□ 1.05
ALDH1A1P00352 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 HOXB1-202ENST00000577092 1414 ntBASIC21.63■■□□□ 1.05
ALDH1A1P00352 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 RN7SL606P-201ENST00000472779 293 ntBASIC21.63■■□□□ 1.05
ALDH1A1P00352 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.63■■□□□ 1.05
ALDH1A1P00352 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALDH1A1P00352 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.62■■□□□ 1.05
ALDH1A1P00352 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ALDH1A1P00352 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALDH1A1P00352 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 AP005212.1-201ENST00000581547 1997 ntBASIC21.61■■□□□ 1.05
ALDH1A1P00352 ZNF815P-204ENST00000434898 1737 ntBASIC21.61■■□□□ 1.05
ALDH1A1P00352 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 IGHGP-201ENST00000390555 1178 ntBASIC21.61■■□□□ 1.05
ALDH1A1P00352 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 MINOS1P3-201ENST00000457048 203 ntBASIC21.61■■□□□ 1.05
ALDH1A1P00352 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.61■■□□□ 1.05
ALDH1A1P00352 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALDH1A1P00352 ZNF259P1-201ENST00000407656 1365 ntBASIC21.61■■□□□ 1.05
ALDH1A1P00352 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 AC005104.2-201ENST00000427818 678 ntBASIC21.6■■□□□ 1.05
ALDH1A1P00352 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.6■■□□□ 1.05
ALDH1A1P00352 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ALDH1A1P00352 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms