Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE6O95741 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE6O95741 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CPNE6O95741 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE6O95741 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CPNE6O95741 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE6O95741 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CPNE6O95741 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CPNE6O95741 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE6O95741 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE6O95741 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CPNE6O95741 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE6O95741 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE6O95741 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPNE6O95741 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE6O95741 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE6O95741 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 AC009237.14-201ENST00000609975 1594 ntBASIC18.6■□□□□ 0.57
CPNE6O95741 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CPNE6O95741 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE6O95741 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 AK4P3-201ENST00000418260 669 ntBASIC18.6■□□□□ 0.57
CPNE6O95741 AC007663.1-201ENST00000438948 1240 ntBASIC18.6■□□□□ 0.57
CPNE6O95741 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.6■□□□□ 0.57
CPNE6O95741 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
CPNE6O95741 LINC01238-205ENST00000567549 1107 ntBASIC18.6■□□□□ 0.57
CPNE6O95741 AC087388.1-201ENST00000571370 1112 ntBASIC18.6■□□□□ 0.57
CPNE6O95741 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE6O95741 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE6O95741 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE6O95741 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE6O95741 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE6O95741 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE6O95741 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CPNE6O95741 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE6O95741 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CPNE6O95741 WWOX-216ENST00000569818 525 ntBASIC18.59■□□□□ 0.57
CPNE6O95741 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CPNE6O95741 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE6O95741 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE6O95741 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPNE6O95741 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE6O95741 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE6O95741 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.59■□□□□ 0.57
CPNE6O95741 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE6O95741 AL691432.2-201ENST00000607222 2038 ntBASIC18.59■□□□□ 0.57
CPNE6O95741 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 AC092338.2-201ENST00000568827 1415 ntBASIC18.58■□□□□ 0.57
CPNE6O95741 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CPNE6O95741 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.58■□□□□ 0.57
CPNE6O95741 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE6O95741 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CPNE6O95741 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE6O95741 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE6O95741 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE6O95741 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 CA15P1-201ENST00000481698 905 ntBASIC18.58■□□□□ 0.56
CPNE6O95741 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE6O95741 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CPNE6O95741 AL023803.3-201ENST00000615559 522 ntBASIC18.58■□□□□ 0.56
CPNE6O95741 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE6O95741 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms