Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDCD6O75340 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDCD6O75340 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 NBPF21P-201ENST00000425093 1451 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.03■□□□□ 0.16
PDCD6O75340 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDCD6O75340 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.03■□□□□ 0.16
PDCD6O75340 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.03■□□□□ 0.16
PDCD6O75340 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PDCD6O75340 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.03■□□□□ 0.16
PDCD6O75340 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.03■□□□□ 0.16
PDCD6O75340 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.03■□□□□ 0.16
PDCD6O75340 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.03■□□□□ 0.16
PDCD6O75340 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.03■□□□□ 0.16
PDCD6O75340 C1QL1P1-201ENST00000568105 661 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 AC142086.2-201ENST00000569753 217 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.03■□□□□ 0.16
PDCD6O75340 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.03■□□□□ 0.16
PDCD6O75340 AC004264.1-201ENST00000608354 794 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.03■□□□□ 0.16
PDCD6O75340 HLA-A-209ENST00000638375 975 ntBASIC16.03■□□□□ 0.16
PDCD6O75340 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.03■□□□□ 0.16
PDCD6O75340 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDCD6O75340 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.02■□□□□ 0.16
PDCD6O75340 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.02■□□□□ 0.16
PDCD6O75340 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.02■□□□□ 0.16
PDCD6O75340 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 AL390961.4-201ENST00000623958 2535 ntBASIC16.02■□□□□ 0.16
PDCD6O75340 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.02■□□□□ 0.16
PDCD6O75340 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.02■□□□□ 0.16
PDCD6O75340 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.02■□□□□ 0.16
PDCD6O75340 TSPY23P-201ENST00000440136 739 ntBASIC16.02■□□□□ 0.16
PDCD6O75340 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.02■□□□□ 0.16
PDCD6O75340 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PDCD6O75340 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDCD6O75340 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.02■□□□□ 0.15
PDCD6O75340 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PDCD6O75340 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDCD6O75340 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
PDCD6O75340 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.02■□□□□ 0.15
PDCD6O75340 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDCD6O75340 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDCD6O75340 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.01■□□□□ 0.15
PDCD6O75340 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PDCD6O75340 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.01■□□□□ 0.15
PDCD6O75340 AC007613.1-201ENST00000572811 2597 ntBASIC16.01■□□□□ 0.15
PDCD6O75340 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.01■□□□□ 0.15
PDCD6O75340 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.01■□□□□ 0.15
PDCD6O75340 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PDCD6O75340 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.01■□□□□ 0.15
PDCD6O75340 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.01■□□□□ 0.15
PDCD6O75340 UNC93B5-201ENST00000530315 699 ntBASIC16.01■□□□□ 0.15
PDCD6O75340 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.01■□□□□ 0.15
PDCD6O75340 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.01■□□□□ 0.15
PDCD6O75340 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.01■□□□□ 0.15
PDCD6O75340 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDCD6O75340 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.01■□□□□ 0.15
PDCD6O75340 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms