Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT3O75175 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CNOT3O75175 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNOT3O75175 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT3O75175 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CNOT3O75175 AC011506.1-201ENST00000474329 610 ntBASIC18.37■□□□□ 0.53
CNOT3O75175 KRT18P21-201ENST00000515767 1272 ntBASIC18.37■□□□□ 0.53
CNOT3O75175 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT3O75175 AL031985.4-201ENST00000642138 673 ntBASIC18.37■□□□□ 0.53
CNOT3O75175 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.37■□□□□ 0.53
CNOT3O75175 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT3O75175 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT3O75175 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT3O75175 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT3O75175 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNOT3O75175 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CNOT3O75175 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNOT3O75175 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT3O75175 CYP2D8P-201ENST00000433633 1490 ntBASIC18.36■□□□□ 0.53
CNOT3O75175 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT3O75175 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT3O75175 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT3O75175 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.36■□□□□ 0.53
CNOT3O75175 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT3O75175 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT3O75175 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
CNOT3O75175 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT3O75175 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 RCN1P1-201ENST00000400413 996 ntBASIC18.35■□□□□ 0.53
CNOT3O75175 B3GAT3P1-201ENST00000471720 806 ntBASIC18.35■□□□□ 0.53
CNOT3O75175 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 FITM1-202ENST00000559294 800 ntBASIC18.35■□□□□ 0.53
CNOT3O75175 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.35■□□□□ 0.53
CNOT3O75175 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.35■□□□□ 0.53
CNOT3O75175 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 MIR6786-201ENST00000616843 113 ntBASIC18.35■□□□□ 0.53
CNOT3O75175 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CNOT3O75175 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT3O75175 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT3O75175 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CNOT3O75175 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CNOT3O75175 AP001271.2-201ENST00000624018 1556 ntBASIC18.34■□□□□ 0.53
CNOT3O75175 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT3O75175 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CNOT3O75175 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT3O75175 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CNOT3O75175 AC026271.3-201ENST00000571884 352 ntBASIC18.34■□□□□ 0.53
CNOT3O75175 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT3O75175 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT3O75175 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT3O75175 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT3O75175 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT3O75175 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNOT3O75175 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CNOT3O75175 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT3O75175 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT3O75175 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT3O75175 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms