Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHD1O14646 AP005212.1-201ENST00000581547 1997 ntBASIC30.74■■■□□ 2.51
CHD1O14646 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CHD1O14646 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC30.74■■■□□ 2.51
CHD1O14646 AL591424.1-201ENST00000442569 1213 ntBASIC30.74■■■□□ 2.51
CHD1O14646 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
CHD1O14646 AC134684.3-201ENST00000641758 218 ntBASIC30.74■■■□□ 2.51
CHD1O14646 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CHD1O14646 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CHD1O14646 AC104109.2-201ENST00000602919 1418 ntBASIC30.74■■■□□ 2.51
CHD1O14646 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC30.74■■■□□ 2.51
CHD1O14646 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.74■■■□□ 2.51
CHD1O14646 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CHD1O14646 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC30.73■■■□□ 2.51
CHD1O14646 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC30.73■■■□□ 2.51
CHD1O14646 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC30.73■■■□□ 2.51
CHD1O14646 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC30.73■■■□□ 2.51
CHD1O14646 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 SART3-203ENST00000546611 1184 ntBASIC30.73■■■□□ 2.51
CHD1O14646 CD63-204ENST00000546939 779 ntTSL 3 BASIC30.73■■■□□ 2.51
CHD1O14646 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC30.73■■■□□ 2.51
CHD1O14646 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CHD1O14646 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CHD1O14646 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 DDT-203ENST00000403754 569 ntTSL 3 BASIC30.73■■■□□ 2.51
CHD1O14646 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD1O14646 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHD1O14646 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHD1O14646 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CHD1O14646 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC30.72■■■□□ 2.51
CHD1O14646 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CHD1O14646 PBK-203ENST00000522944 1499 ntTSL 2 BASIC30.72■■■□□ 2.51
CHD1O14646 HIST2H3DP1-201ENST00000401004 416 ntBASIC30.72■■■□□ 2.51
CHD1O14646 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC30.72■■■□□ 2.51
CHD1O14646 AC005336.2-201ENST00000593183 939 ntBASIC30.72■■■□□ 2.51
CHD1O14646 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 GAS2L1P1-201ENST00000420145 1480 ntBASIC30.71■■■□□ 2.51
CHD1O14646 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
CHD1O14646 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC30.71■■■□□ 2.51
CHD1O14646 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD1O14646 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
CHD1O14646 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC30.7■■■□□ 2.51
CHD1O14646 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC30.7■■■□□ 2.51
CHD1O14646 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC30.7■■■□□ 2.51
CHD1O14646 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC30.7■■■□□ 2.51
CHD1O14646 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CHD1O14646 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC30.7■■■□□ 2.51
CHD1O14646 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
CHD1O14646 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC30.7■■■□□ 2.5
CHD1O14646 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CHD1O14646 PPOX-214ENST00000535223 664 ntTSL 3 BASIC30.7■■■□□ 2.5
CHD1O14646 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC30.7■■■□□ 2.5
CHD1O14646 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CHD1O14646 AC114341.1-201ENST00000618070 349 ntBASIC30.7■■■□□ 2.5
CHD1O14646 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
CHD1O14646 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC30.69■■■□□ 2.5
CHD1O14646 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CHD1O14646 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC30.69■■■□□ 2.5
CHD1O14646 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC30.69■■■□□ 2.5
CHD1O14646 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD1O14646 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1O14646 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC30.68■■■□□ 2.5
CHD1O14646 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC30.68■■■□□ 2.5
CHD1O14646 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC30.68■■■□□ 2.5
CHD1O14646 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1O14646 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1O14646 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHD1O14646 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.68■■■□□ 2.5
CHD1O14646 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms