Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC126763.1-201ENST00000552015 2118 ntBASIC18.43■□□□□ 0.54
UBFD1O14562 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.43■□□□□ 0.54
UBFD1O14562 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
UBFD1O14562 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.42■□□□□ 0.54
UBFD1O14562 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UBFD1O14562 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 AC005332.8-201ENST00000622750 2735 ntBASIC18.42■□□□□ 0.54
UBFD1O14562 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 AC079598.2-202ENST00000546624 1451 ntBASIC18.42■□□□□ 0.54
UBFD1O14562 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 HLA-L-209ENST00000420110 1011 ntBASIC18.42■□□□□ 0.54
UBFD1O14562 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 AP003097.1-201ENST00000530657 1135 ntBASIC18.42■□□□□ 0.54
UBFD1O14562 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.42■□□□□ 0.54
UBFD1O14562 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.42■□□□□ 0.54
UBFD1O14562 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 AL133373.2-201ENST00000623187 2828 ntBASIC18.42■□□□□ 0.54
UBFD1O14562 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.42■□□□□ 0.54
UBFD1O14562 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBFD1O14562 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 Z85996.1-201ENST00000494644 937 ntBASIC18.41■□□□□ 0.54
UBFD1O14562 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.41■□□□□ 0.54
UBFD1O14562 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.41■□□□□ 0.54
UBFD1O14562 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.41■□□□□ 0.54
UBFD1O14562 AC004264.1-201ENST00000608354 794 ntBASIC18.41■□□□□ 0.54
UBFD1O14562 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.41■□□□□ 0.54
UBFD1O14562 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.41■□□□□ 0.54
UBFD1O14562 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.41■□□□□ 0.54
UBFD1O14562 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.41■□□□□ 0.54
UBFD1O14562 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UBFD1O14562 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBFD1O14562 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.4■□□□□ 0.54
UBFD1O14562 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.4■□□□□ 0.54
UBFD1O14562 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.4■□□□□ 0.54
UBFD1O14562 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.4■□□□□ 0.54
UBFD1O14562 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
UBFD1O14562 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.4■□□□□ 0.54
UBFD1O14562 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBFD1O14562 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBFD1O14562 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.4■□□□□ 0.54
UBFD1O14562 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms