Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GPR32P1-201ENST00000601788 811 ntBASIC20.19■□□□□ 0.82
SOX1O00570 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SOX1O00570 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX1O00570 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX1O00570 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SOX1O00570 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SOX1O00570 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX1O00570 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX1O00570 MIR770-201ENST00000390219 98 ntBASIC20.18■□□□□ 0.82
SOX1O00570 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 KRT18P23-201ENST00000435622 1283 ntBASIC20.18■□□□□ 0.82
SOX1O00570 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.18■□□□□ 0.82
SOX1O00570 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 GUSBP12-201ENST00000513727 720 ntBASIC20.18■□□□□ 0.82
SOX1O00570 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX1O00570 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.18■□□□□ 0.82
SOX1O00570 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SOX1O00570 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX1O00570 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX1O00570 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX1O00570 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SOX1O00570 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SOX1O00570 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 C9orf163-202ENST00000624034 2573 ntBASIC20.17■□□□□ 0.82
SOX1O00570 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SOX1O00570 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SOX1O00570 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 PAWRP1-201ENST00000451083 565 ntBASIC20.17■□□□□ 0.82
SOX1O00570 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX1O00570 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX1O00570 AC011467.4-201ENST00000594891 528 ntBASIC20.17■□□□□ 0.82
SOX1O00570 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SOX1O00570 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 MIR1199-201ENST00000621445 119 ntBASIC20.17■□□□□ 0.82
SOX1O00570 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.17■□□□□ 0.82
SOX1O00570 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SOX1O00570 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX1O00570 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX1O00570 RPS2P28-201ENST00000314255 741 ntBASIC20.16■□□□□ 0.82
SOX1O00570 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX1O00570 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SOX1O00570 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.16■□□□□ 0.82
SOX1O00570 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX1O00570 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.16■□□□□ 0.82
SOX1O00570 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
SOX1O00570 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.16■□□□□ 0.82
SOX1O00570 MIR3180-5-201ENST00000583743 153 ntBASIC20.16■□□□□ 0.82
SOX1O00570 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.16■□□□□ 0.82
SOX1O00570 Z83851.2-201ENST00000609564 659 ntBASIC20.16■□□□□ 0.82
SOX1O00570 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.16■□□□□ 0.82
SOX1O00570 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX1O00570 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SOX1O00570 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX1O00570 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX1O00570 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SOX1O00570 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX1O00570 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX1O00570 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.15■□□□□ 0.82
SOX1O00570 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX1O00570 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.15■□□□□ 0.82
SOX1O00570 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SOX1O00570 SPCS2P1-201ENST00000561636 679 ntBASIC20.15■□□□□ 0.82
SOX1O00570 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX1O00570 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.15■□□□□ 0.82
SOX1O00570 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX1O00570 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.15■□□□□ 0.82
SOX1O00570 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX1O00570 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms