Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN3O00409 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN3O00409 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXN3O00409 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXN3O00409 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN3O00409 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXN3O00409 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN3O00409 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN3O00409 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXN3O00409 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
FOXN3O00409 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN3O00409 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
FOXN3O00409 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 MESTP1-201ENST00000404287 994 ntBASIC20.31■□□□□ 0.84
FOXN3O00409 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FOXN3O00409 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN3O00409 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FOXN3O00409 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXN3O00409 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
FOXN3O00409 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
FOXN3O00409 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 AC104581.1-202ENST00000635932 2618 ntBASIC20.31■□□□□ 0.84
FOXN3O00409 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
FOXN3O00409 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN3O00409 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 UBE2SP1-201ENST00000450587 669 ntBASIC20.3■□□□□ 0.84
FOXN3O00409 B3GAT3P1-201ENST00000471720 806 ntBASIC20.3■□□□□ 0.84
FOXN3O00409 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXN3O00409 PRSS44-201ENST00000515154 1146 ntBASIC20.3■□□□□ 0.84
FOXN3O00409 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXN3O00409 CD177P1-201ENST00000606252 935 ntBASIC20.3■□□□□ 0.84
FOXN3O00409 MIR6786-201ENST00000616843 113 ntBASIC20.3■□□□□ 0.84
FOXN3O00409 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FOXN3O00409 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN3O00409 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN3O00409 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN3O00409 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
FOXN3O00409 WIZP1-201ENST00000531444 2299 ntBASIC20.29■□□□□ 0.84
FOXN3O00409 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN3O00409 AL135905.2-201ENST00000584934 1404 ntBASIC20.29■□□□□ 0.84
FOXN3O00409 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN3O00409 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FOXN3O00409 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXN3O00409 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
FOXN3O00409 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXN3O00409 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 NEFHP1-201ENST00000412845 2629 ntBASIC20.29■□□□□ 0.84
FOXN3O00409 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN3O00409 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXN3O00409 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FOXN3O00409 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN3O00409 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXN3O00409 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXN3O00409 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.28■□□□□ 0.84
FOXN3O00409 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
FOXN3O00409 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN3O00409 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
FOXN3O00409 RPS2P55-201ENST00000397318 883 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms