Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AP002383.4-201ENST00000442518 975 ntBASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 AL031008.1-201ENST00000619963 541 ntBASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRABD2BA6NFA1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.21■□□□□ 0.5
TRABD2BA6NFA1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.21■□□□□ 0.5
TRABD2BA6NFA1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.21■□□□□ 0.5
TRABD2BA6NFA1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 RASA4DP-201ENST00000460726 1199 ntBASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRABD2BA6NFA1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 AL160237.2-201ENST00000556165 472 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms