Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 AC008694.1-202ENST00000636953 945 ntBASIC16.54■□□□□ 0.24
SHISA3A0PJX4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 PCDHA12-202ENST00000613593 2588 ntBASIC16.54■□□□□ 0.24
SHISA3A0PJX4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.54■□□□□ 0.24
SHISA3A0PJX4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.53■□□□□ 0.24
SHISA3A0PJX4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHISA3A0PJX4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 AC073210.2-201ENST00000430369 194 ntBASIC16.52■□□□□ 0.24
SHISA3A0PJX4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 AC137761.2-201ENST00000561729 223 ntBASIC16.52■□□□□ 0.24
SHISA3A0PJX4 AC145350.3-201ENST00000569033 163 ntBASIC16.52■□□□□ 0.24
SHISA3A0PJX4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 OR10C1-204ENST00000622521 1039 ntBASIC16.52■□□□□ 0.24
SHISA3A0PJX4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.52■□□□□ 0.24
SHISA3A0PJX4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHISA3A0PJX4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.52■□□□□ 0.23
SHISA3A0PJX4 GNAS-203ENST00000306120 1878 ntBASIC16.52■□□□□ 0.23
SHISA3A0PJX4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHISA3A0PJX4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SHISA3A0PJX4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 YBX1P10-201ENST00000444752 975 ntBASIC16.51■□□□□ 0.23
SHISA3A0PJX4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 MIR5787-201ENST00000611784 55 ntBASIC16.51■□□□□ 0.23
SHISA3A0PJX4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
SHISA3A0PJX4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms