Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 AC092865.7-201ENST00000641832 219 ntBASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
IGHV4-28A0A0C4DH34 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV4-28A0A0C4DH34 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 HMGA1P5-201ENST00000412453 271 ntBASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC007663.1-201ENST00000438948 1240 ntBASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 AL023803.3-201ENST00000615559 522 ntBASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC092338.2-201ENST00000568827 1415 ntBASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV4-28A0A0C4DH34 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC010203.1-204ENST00000548782 407 ntBASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 AL353719.1-201ENST00000566847 864 ntBASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 AC010653.2-201ENST00000623505 997 ntBASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
IGHV4-28A0A0C4DH34 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms