Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 AP003097.1-201ENST00000530657 1135 ntBASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 FER1L4-210ENST00000615531 5998 ntBASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 IRX1P1-201ENST00000438849 1838 ntBASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 AC008403.3-201ENST00000598924 454 ntBASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 AC004264.1-201ENST00000608354 794 ntBASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 FP475955.4-201ENST00000623131 1990 ntBASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-3A0A0B4J271 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms